Nikolina Šoštarić
Bionanoscience department. Delft University of Technology.

Office 58.F1.250
Faculty of Applied Sciences
Van der Maasweg 9
2629 HZ Delft
I am a bioinformatician with passion for education.
In my research, I love applying computational tools to explore the behaviour of biomolecules - what they look like, what they do, how they move, who they interact with, and how all these things are brought together inside cells. In pursuing these questions, I work with modelling, molecular dynamics simulations, omics data, and classification from machine learning.
I also enjoy spreading the love towards science through both teaching and science popularization efforts.
Before joining TU Delft, I was a postdoctoral researcher at Sanquin Institute in Amsterdam and an FWO-funded Ph.D. fellow at KU Leuven in Belgium.
news
Mar 3, 2025 | I’m happy to share that I’ve been awarded Open Education Ambassador Award by TU Delft Extension School for Continuing Education. The awards celebrate individuals nominated by their faculties for their strong advocacy of open and inclusive practices and the sharing of educational resources to make a positive impact on society. |
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Feb 12, 2025 | Toma and Loyola join group for their Nanobiology BEPs. |
Jan 24, 2025 | Sien defended her Nanobiology BEP Engineering a photoreactive ParR substitute for artificial DNA segregation in synthetic cells - insights from molecular dynamics and biophysical characterization. Congratulations! |
Dec 11, 2024 | Renske defended her Nanobiology MEP Exploring the protein domain interaction map of yeast polarity in 3D using bioinformatic tools. Congratulations! |
Dec 1, 2024 | I’m excited to share that my open interactive textbook Programming Foundations is now published. This introductory programming book offers a hands-on approach to learning Python, designed specifically for students of natural sciences who wish to enter the world of coding. |
Nov 7, 2024 | I’m thrilled to announce that I have been awarded the TU Delft Education Fellowship for my project “AI-enhanced programming education for applied scientists”. |
Nov 11, 2024 | Stanislas joins group for his Nanobiology BEP. |
Oct 7, 2024 | Lisa joins group for her Nanobiology MEP. |
Oct 28, 2024 | I’m joining Innovation in Delft Engineering Education (IDEE) on “Teaching and learning in the age of AI”. |
Sep 30, 2024 | I’m joining the Teaching Academy panel for the academic year 2024/25. |
Sep 2, 2024 | Stefan joins group for his PhD, Eva and Lina for their Nanobiology MEPs, and Sien and Laetitia for their Nanobiology BEPs. Welcome all! |
Sep 1, 2024 | I’m joining the board of Delft Young Academy. |
Jul 12, 2024 | Stephany defended her Life Science & Technology BEP The impact of Arg2579Trp mutation on the homodimer formation of mouse teneurin-3. Congratulations! |
Jul 10, 2024 | Stefan defended his Nanobiology MEP Phosphorylation-induced structural dynamics of SARS-CoV-2 N-protein - Insights from molecular dynamics simulations, and Ada defended her Nanobiology BEP Defining a protein interaction network - Mapping the interaction partners of Spa2 in yeast. Congratulations to both! |
Jul 8, 2024 | Eli defended his Nanobiology BEP Simulating the dynamics of lipid bilayers. Congratulations! |
Jul 2, 2024 | Owyn defended his Nanobiology BEP RNA distribution clustering - Unravelling cytotoxic T-cells. Congratulations! |
Jun 1, 2024 | Our joint proposal with Kumar group at IIT Delhi has been approved for TUD/IITD seed funding. For the coming year, we will be working together on fibrinogen interactions with bioresorbable stent surfaces. |
Apr 23, 2024 | Jesse defended his Nanobiology BEP The viability and potential of Mycoplasma mycoides subsp. capri genes in liposome minimal cell systems. Congratulations! |
Apr 17, 2024 | Stephany joins group for her LST BEP. |
Feb 29, 2024 | I’m attending ICAB conference on AI & Higher Education in Wageningen. |
Feb 12, 2024 | Ada, Eli, and Owyn join group for their Nanobiology BEPs. |
Dec 5, 2023 | I’m attending EMBO workshop Computational structural biology in Heidelberg. |
Oct 9, 2023 | Jesse joins group for his Nanobiology BEP. |
Sep 20, 2023 | Renske and Stefan join group for their Nanobiology MEPs. |
Aug 1, 2023 | I joined Bionanoscience department of TU Delft as an assistant professor with emphasis on education (Van Rijn position). |
Oct 14, 2022 | I’m presenting at EMBO symposium The complex life of RNA in Heidelberg. |
May 13, 2022 | I’m presenting our research on translation in human CD8+ T cells at the Dutch RNA conference in Leiden. |
Sep 1, 2021 | I joined T cell differentiation group of Monika Wolkers at Sanquin for a postdoc. |